WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02C5.5b.1 Sequence Name  T02C5.5b.1
Length (nt)  6848   Chromosome Location  X: 2710920-2736277
Chromosome . Primary Identifier  X Chromosome Location . Start  2710920
Chromosome Location . End  2736277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02C5.5b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006742 unc-2 T02C5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02C5.5b T02C5.5b 6084   X: 2711628-2711798

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02C5.5b.1 2710920 2736277 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226471   879   X: 2710920-2711798 Caenorhabditis elegans
Exon226490   185   X: 2712355-2712539 Caenorhabditis elegans
Exon226500   150   X: 2712582-2712731 Caenorhabditis elegans
Exon226514   291   X: 2712787-2713077 Caenorhabditis elegans
Exon226528   121   X: 2713276-2713396 Caenorhabditis elegans
Exon226547   88   X: 2715092-2715179 Caenorhabditis elegans
Exon226561   101   X: 2716008-2716108 Caenorhabditis elegans
Exon226575   213   X: 2716157-2716369 Caenorhabditis elegans
Exon226593   89   X: 2716915-2717003 Caenorhabditis elegans
Exon226608   311   X: 2717108-2717418 Caenorhabditis elegans
Exon226623   653   X: 2717465-2718117 Caenorhabditis elegans
Exon226638   783   X: 2718804-2719586 Caenorhabditis elegans
Exon226653   106   X: 2719637-2719742 Caenorhabditis elegans
Exon226668   107   X: 2720170-2720276 Caenorhabditis elegans
Exon226683   287   X: 2720819-2721105 Caenorhabditis elegans
Exon226698   213   X: 2721155-2721367 Caenorhabditis elegans
Exon226713   121   X: 2721418-2721538 Caenorhabditis elegans
Exon226728   428   X: 2721584-2722011 Caenorhabditis elegans
Exon226743   128   X: 2722059-2722186 Caenorhabditis elegans
Exon226758   58   X: 2722642-2722699 Caenorhabditis elegans
Exon226772   227   X: 2723235-2723461 Caenorhabditis elegans
Exon226788   90   X: 2724083-2724172 Caenorhabditis elegans
Exon226803   193   X: 2724219-2724411 Caenorhabditis elegans
Exon226818   273   X: 2724464-2724736 Caenorhabditis elegans
Exon226833   128   X: 2724824-2724951 Caenorhabditis elegans
Exon226849   320   X: 2725442-2725761 Caenorhabditis elegans
Exon226862   97   X: 2730538-2730634 Caenorhabditis elegans
Exon226877   208   X: 2736070-2736277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02C5.5b.1 2710920 2736277 -1

1 Sequence

Length
6848

1 Sequence Ontology Term

Identifier Name Description
transcript