WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14A11.3b.1 Sequence Name  C14A11.3b.1
Length (nt)  3677   Chromosome Location  X: 2772042-2799243
Chromosome . Primary Identifier  X Chromosome Location . Start  2772042
Chromosome Location . End  2799243 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14A11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006496 cgef-1 C14A11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14A11.3b C14A11.3b 3168   X: 2772078-2772169

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14A11.3b.1 2772042 2799243 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon226920   128   X: 2772042-2772169 Caenorhabditis elegans
Exon226922   82   X: 2773815-2773896 Caenorhabditis elegans
Exon226923   145   X: 2774549-2774693 Caenorhabditis elegans
Exon226926   84   X: 2775127-2775210 Caenorhabditis elegans
Exon226927   109   X: 2775385-2775493 Caenorhabditis elegans
Exon226928   91   X: 2776119-2776209 Caenorhabditis elegans
Exon226930   111   X: 2778330-2778440 Caenorhabditis elegans
Exon226931   117   X: 2779686-2779802 Caenorhabditis elegans
Exon226933   150   X: 2780664-2780813 Caenorhabditis elegans
Exon226934   142   X: 2781493-2781634 Caenorhabditis elegans
Exon226935   98   X: 2782528-2782625 Caenorhabditis elegans
Exon226936   120   X: 2785576-2785695 Caenorhabditis elegans
Exon226937   69   X: 2786092-2786160 Caenorhabditis elegans
Exon226938   126   X: 2786206-2786331 Caenorhabditis elegans
Exon226939   126   X: 2786374-2786499 Caenorhabditis elegans
Exon226940   84   X: 2787613-2787696 Caenorhabditis elegans
Exon226942   141   X: 2789983-2790123 Caenorhabditis elegans
Exon226948   105   X: 2796605-2796709 Caenorhabditis elegans
Exon226952   239   X: 2796762-2797000 Caenorhabditis elegans
Exon226955   517   X: 2797439-2797955 Caenorhabditis elegans
Exon226958   345   X: 2798004-2798348 Caenorhabditis elegans
Exon226960   548   X: 2798696-2799243 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14A11.3b.1 2772042 2799243 1

1 Sequence

Length
3677

1 Sequence Ontology Term

Identifier Name Description
transcript