WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58H12.1.1 Sequence Name  F58H12.1.1
Length (nt)  3409   Chromosome Location  X: 2843922-2852438
Chromosome . Primary Identifier  X Chromosome Location . Start  2843922
Chromosome Location . End  2852438 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58H12.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002210 kin-29 F58H12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58H12.1 F58H12.1 2469   X: 2844811-2844995

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58H12.1.1 2843922 2852438 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227003   1074   X: 2843922-2844995 Caenorhabditis elegans
Exon227004   112   X: 2845053-2845164 Caenorhabditis elegans
Exon227005   117   X: 2845918-2846034 Caenorhabditis elegans
Exon227006   124   X: 2846088-2846211 Caenorhabditis elegans
Exon227007   618   X: 2846257-2846874 Caenorhabditis elegans
Exon227008   131   X: 2847602-2847732 Caenorhabditis elegans
Exon227009   137   X: 2847783-2847919 Caenorhabditis elegans
Exon227010   85   X: 2847967-2848051 Caenorhabditis elegans
Exon227011   245   X: 2849181-2849425 Caenorhabditis elegans
Exon227012   159   X: 2849485-2849643 Caenorhabditis elegans
Exon227013   90   X: 2849694-2849783 Caenorhabditis elegans
Exon227014   162   X: 2849843-2850004 Caenorhabditis elegans
Exon227015   64   X: 2850053-2850116 Caenorhabditis elegans
Exon227016   117   X: 2850163-2850279 Caenorhabditis elegans
Exon227017   87   X: 2850876-2850962 Caenorhabditis elegans
Exon227018   87   X: 2852352-2852438 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58H12.1.1 2843922 2852438 -1

1 Sequence

Length
3409

1 Sequence Ontology Term

Identifier Name Description
transcript