WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F53B3.1 Sequence Name  F53B3.1
Length (nt)  1632   Chromosome Location  X: 2853942-2853988
Chromosome . Primary Identifier  X Chromosome Location . Start  2853942
Chromosome Location . End  2853988
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28444 TRA-4 63.8 543 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048082
WBRNAi00027361
WBRNAi00015479
WBRNAi00025580
WBRNAi00025581
WBRNAi00032671
WBRNAi00061972
WBRNAi00077600
WBRNAi00095056

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F53B3.1 2853942 2853988 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018740 tra-4 F53B3.1 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F53B3.1 2853942 2853988 -1
CDS:F53B3.1 2854041 2854167 -1
CDS:F53B3.1 2854433 2854753 -1
CDS:F53B3.1 2855164 2855422 -1
CDS:F53B3.1 2855475 2856021 -1
CDS:F53B3.1 2856075 2856274 -1
CDS:F53B3.1 2857056 2857120 -1
CDS:F53B3.1 2857172 2857237 -1

1 Sequence

Length
1632

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F53B3.1.2 F53B3.1.2 1985   X: 2853674-2857603
Transcript:F53B3.1.1 F53B3.1.1 1903   X: 2853679-2857245