WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:B0410.2a Sequence Name  B0410.2a
Length (nt)  1599   Chromosome Location  X: 2885872-2886027
Chromosome . Primary Identifier  X Chromosome Location . Start  2885872
Chromosome Location . End  2886027
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0410.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE06708 VANG-1, isoform a 60.4 532 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00039028
WBRNAi00039029
WBRNAi00112514
WBRNAi00009755
WBRNAi00028127

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:B0410.2a 2885872 2886027 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015171 vang-1 B0410.2 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:B0410.2a 2885872 2886027 1
CDS:B0410.2a 2886840 2886973 1
CDS:B0410.2a 2887024 2887156 1
CDS:B0410.2a 2887209 2887427 1
CDS:B0410.2a 2888195 2888637 1
CDS:B0410.2a 2888982 2889200 1
CDS:B0410.2a 2889252 2889420 1
CDS:B0410.2a 2890176 2890301 1

1 Sequence

Length
1599

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:B0410.2a.1 B0410.2a.1 1993   X: 2885858-2890681