WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52B10.1b Sequence Name  F52B10.1b
Length (nt)  5871   Chromosome Location  X: 2909556-2909686
Chromosome . Primary Identifier  X Chromosome Location . Start  2909556
Chromosome Location . End  2909686
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B10.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04618 NMY-1, isoform b 228.6 1956 Caenorhabditis elegans
 

Other

11 RNAi

WormBase ID
WBRNAi00063300
WBRNAi00063301
WBRNAi00008825
WBRNAi00000456
WBRNAi00047912
WBRNAi00083933
WBRNAi00114445
WBRNAi00032577
WBRNAi00095384
WBRNAi00063299
WBRNAi00114643

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52B10.1b 2909556 2909686 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003776 nmy-1 F52B10.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52B10.1b 2909556 2909686 1
CDS:F52B10.1b 2909735 2909927 1
CDS:F52B10.1b 2909975 2910131 1
CDS:F52B10.1b 2910189 2910340 1
CDS:F52B10.1b 2911111 2911203 1
CDS:F52B10.1b 2911259 2911421 1
CDS:F52B10.1b 2911889 2912032 1
CDS:F52B10.1b 2912082 2912555 1
CDS:F52B10.1b 2912610 2913730 1
CDS:F52B10.1b 2913787 2913981 1
CDS:F52B10.1b 2914027 2914604 1
CDS:F52B10.1b 2914751 2914865 1
CDS:F52B10.1b 2914916 2915227 1
CDS:F52B10.1b 2915276 2915965 1
CDS:F52B10.1b 2916020 2917075 1
CDS:F52B10.1b 2917153 2917313 1
CDS:F52B10.1b 2917357 2917457 1
CDS:F52B10.1b 2917511 2917545 1

1 Sequence

Length
5871

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B10.1b.1 F52B10.1b.1 6398   X: 2909528-2918044