WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00197848 Gene Name  F52B10.15
Sequence Name  ? F52B10.15 Organism  Caenorhabditis elegans
Automated Description  Is affected by ifo-1 based on microarray studies. Biotype  SO:0001263
Genetic Position  :± Length (nt)  ? 98
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00197848

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52B10.15 F52B10.15 98   X: 2932120-2932217
 

Other

0 CDSs

0 RNAi Result

1 Allele

Public Name
gk963725

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00197848 2932120 2932217 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrX_2930470..2932119   1650 X: 2930470-2932119 Caenorhabditis elegans

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in ifo-1(kc2) comparing to in N2 animals. ANOVA, p-value < 0.05. WBPaper00056167:ifo-1(kc2)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00197848 2932120 2932217 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
98

1 Sequence Ontology Term