WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  ANOVA, p-value < 0.05. Description  Transcripts that showed significantly increased expression in ifo-1(kc2) comparing to in N2 animals.
Primary Identifier  WBPaper00056167:ifo-1(kc2)_upregulated

1 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772

254 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000245 bca-1 T13C5.5 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000787 cps-6 C41D11.8 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000982 dhs-19 T11F9.11 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00000989 dhs-26 ZK816.5 Caenorhabditis elegans
WBGene00001397 fat-5 W06D12.3 Caenorhabditis elegans
WBGene00001399 fat-7 F10D2.9 Caenorhabditis elegans
WBGene00001500 ftn-1 C54F6.14 Caenorhabditis elegans
WBGene00001604 gln-3 Y105C5B.28 Caenorhabditis elegans
WBGene00001752 gst-4 K08F4.7 Caenorhabditis elegans
WBGene00001758 gst-10 Y45G12C.2 Caenorhabditis elegans
WBGene00002018 hsp-16.41 Y46H3A.2 Caenorhabditis elegans
WBGene00002224 klp-13 F22F4.3 Caenorhabditis elegans
WBGene00002260 lbp-8 T22G5.6 Caenorhabditis elegans
WBGene00003094 lys-5 F58B3.2 Caenorhabditis elegans
WBGene00003095 lys-6 F58B3.3 Caenorhabditis elegans
WBGene00003099 lys-10 F17E9.11 Caenorhabditis elegans
WBGene00003169 mec-5 E03G2.3 Caenorhabditis elegans
WBGene00003233 mgl-2 F45H11.4 Caenorhabditis elegans
WBGene00003387 mod-5 Y54E10BR.7 Caenorhabditis elegans
WBGene00003704 nhr-114 Y45G5AM.1 Caenorhabditis elegans
WBGene00003847 blmp-1 F25D7.3 Caenorhabditis elegans
WBGene00003999 pgp-5 C05A9.1 Caenorhabditis elegans
WBGene00004000 pgp-6 T21E8.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018350 ifo-1 F42C5.10 Caenorhabditis elegans

0 Regulated By Molecule