WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C33D12.2b.4 Sequence Name  C33D12.2b.4
Length (nt)  2732   Chromosome Location  X: 3036514-3044992
Chromosome . Primary Identifier  X Chromosome Location . Start  3036514
Chromosome Location . End  3044992 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C33D12.2b C33D12.2b 753   X: 3036926-3037063

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2b.4 3036514 3044992 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227441   550   X: 3036514-3037063 Caenorhabditis elegans
Exon227449   64   X: 3037449-3037512 Caenorhabditis elegans
Exon227458   113   X: 3037558-3037670 Caenorhabditis elegans
Exon227467   279   X: 3038530-3038808 Caenorhabditis elegans
Exon227477   168   X: 3038858-3039025 Caenorhabditis elegans
Exon227486   183   X: 3041987-3042169 Caenorhabditis elegans
Exon227493   164   X: 3042314-3042477 Caenorhabditis elegans
Exon227500   274   X: 3043124-3043397 Caenorhabditis elegans
Exon227504   88   X: 3043481-3043568 Caenorhabditis elegans
Exon227508   323   X: 3043615-3043937 Caenorhabditis elegans
Exon227514   145   X: 3044367-3044511 Caenorhabditis elegans
Exon227520   186   X: 3044560-3044745 Caenorhabditis elegans
Exon227527   195   X: 3044798-3044992 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C33D12.2b.4 3036514 3044992 -1

1 Sequence

Length
2732

1 Sequence Ontology Term

Identifier Name Description
transcript