WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C33D12.2b Sequence Name  C33D12.2b
Length (nt)  753   Chromosome Location  X: 3036926-3037063
Chromosome . Primary Identifier  X Chromosome Location . Start  3036926
Chromosome Location . End  3037063
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C33D12.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04764 CNNM-3, isoform b 28.0 250 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00034385
WBRNAi00050824
WBRNAi00017129
WBRNAi00017134
WBRNAi00093032

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C33D12.2b 3036926 3037063 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016343 cnnm-3 C33D12.2 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C33D12.2b 3036926 3037063 -1
CDS:C33D12.2b 3037449 3037512 -1
CDS:C33D12.2b 3037558 3037670 -1
CDS:C33D12.2b 3038530 3038808 -1
CDS:C33D12.2b 3038858 3039016 -1

1 Sequence

Length
753

1 Sequence Ontology Term

Identifier Name Description
CDS  

6 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C33D12.2b.2 C33D12.2b.2 2553   X: 3036427-3045847
Transcript:C33D12.2b.6 C33D12.2b.6 1620   X: 3036427-3040769
Transcript:C33D12.2b.1 C33D12.2b.1 2964   X: 3036427-3045847
Transcript:C33D12.2b.3 C33D12.2b.3 2471   X: 3036479-3045847
Transcript:C33D12.2b.5 C33D12.2b.5 1839   X: 3036493-3042774
Transcript:C33D12.2b.4 C33D12.2b.4 2732   X: 3036514-3044992