WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F52E4.7 Sequence Name  F52E4.7
Length (nt)  2547   Chromosome Location  X: 3095671-3095922
Chromosome . Primary Identifier  X Chromosome Location . Start  3095671
Chromosome Location . End  3095922
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E4.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10836 SEC-3 97.3 848 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00048000
WBRNAi00025571
WBRNAi00081455
WBRNAi00081463
WBRNAi00080625
WBRNAi00032626
WBRNAi00002382
WBRNAi00111792
WBRNAi00008829

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F52E4.7 3095671 3095922 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018703 sec-3 F52E4.7 Caenorhabditis elegans

13 Locations


Feature . Primary Identifier
Start End Strand
CDS:F52E4.7 3095671 3095922 -1
CDS:F52E4.7 3095972 3096070 -1
CDS:F52E4.7 3096522 3096646 -1
CDS:F52E4.7 3096695 3096956 -1
CDS:F52E4.7 3097005 3097131 -1
CDS:F52E4.7 3097181 3097535 -1
CDS:F52E4.7 3097582 3097828 -1
CDS:F52E4.7 3098138 3098309 -1
CDS:F52E4.7 3098357 3098529 -1
CDS:F52E4.7 3098579 3098956 -1
CDS:F52E4.7 3099008 3099106 -1
CDS:F52E4.7 3099534 3099661 -1
CDS:F52E4.7 3099708 3099837 -1

1 Sequence

Length
2547

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F52E4.7.1 F52E4.7.1 2805   X: 3095428-3099852