WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:K10B3.6a Sequence Name  K10B3.6a
Length (nt)  1995   Chromosome Location  X: 3106634-3106769
Chromosome . Primary Identifier  X Chromosome Location . Start  3106634
Chromosome Location . End  3106769
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K10B3.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46326 GPCP-1, isoform a 75.6 664 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00000956
WBRNAi00050479
WBRNAi00016950

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:K10B3.6a 3106634 3106769 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019612 gpcp-1 K10B3.6 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:K10B3.6a 3106634 3106769 -1
CDS:K10B3.6a 3106816 3106946 -1
CDS:K10B3.6a 3107795 3107887 -1
CDS:K10B3.6a 3107937 3108012 -1
CDS:K10B3.6a 3108247 3108377 -1
CDS:K10B3.6a 3108425 3108640 -1
CDS:K10B3.6a 3108691 3108813 -1
CDS:K10B3.6a 3108931 3109024 -1
CDS:K10B3.6a 3109069 3109213 -1
CDS:K10B3.6a 3109257 3109395 -1
CDS:K10B3.6a 3109449 3109562 -1
CDS:K10B3.6a 3109620 3109688 -1
CDS:K10B3.6a 3109942 3110099 -1
CDS:K10B3.6a 3110145 3110242 -1
CDS:K10B3.6a 3110303 3110428 -1
CDS:K10B3.6a 3110470 3110615 -1

1 Sequence

Length
1995

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:K10B3.6a.1 K10B3.6a.1 2107   X: 3106535-3110628