WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52E4.8.1 Sequence Name  F52E4.8.1
Length (nt)  1378   Chromosome Location  X: 3100166-3102175
Chromosome . Primary Identifier  X Chromosome Location . Start  3100166
Chromosome Location . End  3102175 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52E4.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018704 ztf-13 F52E4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52E4.8 F52E4.8 1047   X: 3100481-3100609

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52E4.8.1 3100166 3102175 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon227682   444   X: 3100166-3100609 Caenorhabditis elegans
Exon227683   118   X: 3101081-3101198 Caenorhabditis elegans
Exon227684   155   X: 3101245-3101399 Caenorhabditis elegans
Exon227685   225   X: 3101451-3101675 Caenorhabditis elegans
Exon227686   436   X: 3101740-3102175 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52E4.8.1 3100166 3102175 -1

1 Sequence

Length
1378

1 Sequence Ontology Term

Identifier Name Description
transcript