WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F56E3.4a Sequence Name  F56E3.4a
Length (nt)  1260   Chromosome Location  X: 3197367-3197831
Chromosome . Primary Identifier  X Chromosome Location . Start  3197367
Chromosome Location . End  3197831
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56E3.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE28464 FAX-1, isoform a 46.2 419 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00048731
WBRNAi00015837
WBRNAi00027911
WBRNAi00115862

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F56E3.4a 3197367 3197831 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001400 fax-1 F56E3.4 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:F56E3.4a 3197367 3197831 -1
CDS:F56E3.4a 3197884 3197982 -1
CDS:F56E3.4a 3198032 3198213 -1
CDS:F56E3.4a 3198261 3198431 -1
CDS:F56E3.4a 3198480 3198692 -1
CDS:F56E3.4a 3198750 3198830 -1
CDS:F56E3.4a 3199241 3199289 -1

1 Sequence

Length
1260

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F56E3.4a.1 F56E3.4a.1 1376   X: 3197283-3199321