WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40F4.2.2 Sequence Name  F40F4.2.2
Length (nt)  567   Chromosome Location  X: 3260778-3261446
Chromosome . Primary Identifier  X Chromosome Location . Start  3260778
Chromosome Location . End  3261446 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.2.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002254 lbp-2 F40F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40F4.2 F40F4.2 486   X: 3260802-3261119

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F40F4.2.2 3260778 3261446 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228008   342   X: 3260778-3261119 Caenorhabditis elegans
Exon228010   114   X: 3261176-3261289 Caenorhabditis elegans
Exon228011   111   X: 3261336-3261446 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F40F4.2.2 3260778 3261446 1

1 Sequence

Length
567

1 Sequence Ontology Term

Identifier Name Description
transcript