WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F40F4.2 Sequence Name  F40F4.2
Length (nt)  486   Chromosome Location  X: 3260802-3261119
Chromosome . Primary Identifier  X Chromosome Location . Start  3260802
Chromosome Location . End  3261119
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40F4.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04532 LBP-2 18.8 161 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00001625
WBRNAi00046864
WBRNAi00014656
WBRNAi00032031
WBRNAi00070738
WBRNAi00102643
WBRNAi00088955
WBRNAi00070739

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F40F4.2 3260802 3261119 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002254 lbp-2 F40F4.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F40F4.2 3260802 3261119 1
CDS:F40F4.2 3261176 3261289 1
CDS:F40F4.2 3261336 3261389 1

1 Sequence

Length
486

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F40F4.2.1 F40F4.2.1 759   X: 3260610-3261470
Transcript:F40F4.2.2 F40F4.2.2 567   X: 3260778-3261446