WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.4.1 Sequence Name  K09C4.4.1
Length (nt)  1642   Chromosome Location  X: 3289483-3292477
Chromosome . Primary Identifier  X Chromosome Location . Start  3289483
Chromosome Location . End  3292477 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019549 K09C4.4 K09C4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.4 K09C4.4 1575   X: 3289485-3289654

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.4.1 3289483 3292477 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228122   172   X: 3289483-3289654 Caenorhabditis elegans
Exon228123   120   X: 3289695-3289814 Caenorhabditis elegans
Exon228124   164   X: 3289860-3290023 Caenorhabditis elegans
Exon228125   52   X: 3290071-3290122 Caenorhabditis elegans
Exon228126   75   X: 3290371-3290445 Caenorhabditis elegans
Exon228127   131   X: 3290497-3290627 Caenorhabditis elegans
Exon228128   95   X: 3290670-3290764 Caenorhabditis elegans
Exon228129   111   X: 3290811-3290921 Caenorhabditis elegans
Exon228130   116   X: 3291483-3291598 Caenorhabditis elegans
Exon228131   80   X: 3291648-3291727 Caenorhabditis elegans
Exon228132   113   X: 3291779-3291891 Caenorhabditis elegans
Exon228133   207   X: 3291933-3292139 Caenorhabditis elegans
Exon228134   45   X: 3292184-3292228 Caenorhabditis elegans
Exon228135   54   X: 3292270-3292323 Caenorhabditis elegans
Exon228136   107   X: 3292371-3292477 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.4.1 3289483 3292477 1

1 Sequence

Length
1642

1 Sequence Ontology Term

Identifier Name Description
transcript