WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K09C4.2.1 Sequence Name  K09C4.2.1
Length (nt)  507   Chromosome Location  X: 3296482-3298031
Chromosome . Primary Identifier  X Chromosome Location . Start  3296482
Chromosome Location . End  3298031 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K09C4.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019548 K09C4.2 K09C4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K09C4.2 K09C4.2 459   X: 3296530-3296544

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.2.1 3296482 3298031 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228140   63   X: 3296482-3296544 Caenorhabditis elegans
Exon228141   93   X: 3296603-3296695 Caenorhabditis elegans
Exon228142   134   X: 3297484-3297617 Caenorhabditis elegans
Exon228143   73   X: 3297670-3297742 Caenorhabditis elegans
Exon228144   45   X: 3297788-3297832 Caenorhabditis elegans
Exon228145   54   X: 3297889-3297942 Caenorhabditis elegans
Exon228146   45   X: 3297987-3298031 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K09C4.2.1 3296482 3298031 1

1 Sequence

Length
507

1 Sequence Ontology Term

Identifier Name Description
transcript