WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK813.5.1 Sequence Name  ZK813.5.1
Length (nt)  1566   Chromosome Location  X: 3448689-3451222
Chromosome . Primary Identifier  X Chromosome Location . Start  3448689
Chromosome Location . End  3451222 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK813.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022824 ZK813.5 ZK813.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK813.5 ZK813.5 1416   X: 3448804-3449036

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK813.5.1 3448689 3451222 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228483   348   X: 3448689-3449036 Caenorhabditis elegans
Exon228484   156   X: 3449093-3449248 Caenorhabditis elegans
Exon228485   100   X: 3449297-3449396 Caenorhabditis elegans
Exon228486   177   X: 3449468-3449644 Caenorhabditis elegans
Exon228487   93   X: 3449690-3449782 Caenorhabditis elegans
Exon228488   97   X: 3449829-3449925 Caenorhabditis elegans
Exon228489   109   X: 3450433-3450541 Caenorhabditis elegans
Exon228490   124   X: 3450591-3450714 Caenorhabditis elegans
Exon228491   160   X: 3450763-3450922 Caenorhabditis elegans
Exon228492   61   X: 3450974-3451034 Caenorhabditis elegans
Exon228493   141   X: 3451082-3451222 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK813.5.1 3448689 3451222 -1

1 Sequence

Length
1566

1 Sequence Ontology Term

Identifier Name Description
transcript