WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27A10.3a Sequence Name  T27A10.3a
Length (nt)  1029   Chromosome Location  X: 3576614-3576745
Chromosome . Primary Identifier  X Chromosome Location . Start  3576614
Chromosome Location . End  3576745
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27A10.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE07553 CKC-1, isoform a 39.7 342 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00054255
WBRNAi00019297
WBRNAi00036014
WBRNAi00084001
WBRNAi00084003
WBRNAi00083993

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27A10.3a 3576614 3576745 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000515 ckc-1 T27A10.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27A10.3a 3576614 3576745 1
CDS:T27A10.3a 3576841 3577091 1
CDS:T27A10.3a 3577607 3577733 1
CDS:T27A10.3a 3577784 3578009 1
CDS:T27A10.3a 3578085 3578307 1
CDS:T27A10.3a 3578657 3578726 1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27A10.3a.1 T27A10.3a.1 1139   X: 3576608-3578830