WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R11G1.6c.1 Sequence Name  R11G1.6c.1
Length (nt)  2794   Chromosome Location  X: 3639169-3644506
Chromosome . Primary Identifier  X Chromosome Location . Start  3639169
Chromosome Location . End  3644506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.6c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020012 tmem-24 R11G1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R11G1.6c R11G1.6c 2436   X: 3639504-3639579

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6c.1 3639169 3644506 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon228942   411   X: 3639169-3639579 Caenorhabditis elegans
Exon228945   82   X: 3639639-3639720 Caenorhabditis elegans
Exon228950   77   X: 3639766-3639842 Caenorhabditis elegans
Exon228953   117   X: 3639932-3640048 Caenorhabditis elegans
Exon228957   213   X: 3640424-3640636 Caenorhabditis elegans
Exon228961   442   X: 3640679-3641120 Caenorhabditis elegans
Exon228965   338   X: 3641169-3641506 Caenorhabditis elegans
Exon228969   188   X: 3641551-3641738 Caenorhabditis elegans
Exon228973   150   X: 3641799-3641948 Caenorhabditis elegans
Exon228977   252   X: 3642569-3642820 Caenorhabditis elegans
Exon228981   120   X: 3642864-3642983 Caenorhabditis elegans
Exon228985   105   X: 3643035-3643139 Caenorhabditis elegans
Exon228989   154   X: 3643192-3643345 Caenorhabditis elegans
Exon228993   145   X: 3644362-3644506 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R11G1.6c.1 3639169 3644506 -1

1 Sequence

Length
2794

1 Sequence Ontology Term

Identifier Name Description
transcript