WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R11G1.4a Sequence Name  R11G1.4a
Length (nt)  1431   Chromosome Location  X: 3646655-3646708
Chromosome . Primary Identifier  X Chromosome Location . Start  3646655
Chromosome Location . End  3646708
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R11G1.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39615 SAX-1, isoform a 55.5 476 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00051802
WBRNAi00078437

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R11G1.4a 3646655 3646708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004727 sax-1 R11G1.4 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R11G1.4a 3646655 3646708 -1
CDS:R11G1.4a 3647266 3647384 -1
CDS:R11G1.4a 3647430 3647628 -1
CDS:R11G1.4a 3647680 3647792 -1
CDS:R11G1.4a 3647843 3647960 -1
CDS:R11G1.4a 3648007 3648171 -1
CDS:R11G1.4a 3648215 3648369 -1
CDS:R11G1.4a 3649481 3649688 -1
CDS:R11G1.4a 3649744 3649883 -1
CDS:R11G1.4a 3649930 3650038 -1
CDS:R11G1.4a 3650085 3650135 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R11G1.4a.1 R11G1.4a.1 1781   X: 3646320-3650150