WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02F12.4.1 Sequence Name  C02F12.4.1
Length (nt)  2211   Chromosome Location  X: 3674041-3678557
Chromosome . Primary Identifier  X Chromosome Location . Start  3674041
Chromosome Location . End  3678557 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02F12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006431 tag-52 C02F12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02F12.4 C02F12.4 1998   X: 3674251-3674430

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02F12.4.1 3674041 3678557 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229073   390   X: 3674041-3674430 Caenorhabditis elegans
Exon229074   359   X: 3676060-3676418 Caenorhabditis elegans
Exon229075   78   X: 3676485-3676562 Caenorhabditis elegans
Exon229076   78   X: 3676606-3676683 Caenorhabditis elegans
Exon229077   331   X: 3676730-3677060 Caenorhabditis elegans
Exon229078   177   X: 3677114-3677290 Caenorhabditis elegans
Exon229079   161   X: 3677334-3677494 Caenorhabditis elegans
Exon229080   184   X: 3677539-3677722 Caenorhabditis elegans
Exon229081   216   X: 3677773-3677988 Caenorhabditis elegans
Exon229082   237   X: 3678321-3678557 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02F12.4.1 3674041 3678557 -1

1 Sequence

Length
2211

1 Sequence Ontology Term

Identifier Name Description
transcript