WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F35A5.1.1 Sequence Name  F35A5.1.1
Length (nt)  7148   Chromosome Location  X: 3807466-3816429
Chromosome . Primary Identifier  X Chromosome Location . Start  3807466
Chromosome Location . End  3816429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F35A5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018024 F35A5.1 F35A5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35A5.1 F35A5.1 6936   X: 3807466-3813692

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F35A5.1.1 3807466 3816429 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon229467   6227   X: 3807466-3813692 Caenorhabditis elegans
Exon229468   62   X: 3813735-3813796 Caenorhabditis elegans
Exon229469   212   X: 3813841-3814052 Caenorhabditis elegans
Exon229470   87   X: 3814581-3814667 Caenorhabditis elegans
Exon229471   135   X: 3814712-3814846 Caenorhabditis elegans
Exon229472   189   X: 3815169-3815357 Caenorhabditis elegans
Exon229473   236   X: 3816194-3816429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F35A5.1.1 3807466 3816429 1

1 Sequence

Length
7148

1 Sequence Ontology Term

Identifier Name Description
transcript