WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T06F4.2a Sequence Name  T06F4.2a
Length (nt)  3153   Chromosome Location  X: 4095244-4095582
Chromosome . Primary Identifier  X Chromosome Location . Start  4095244
Chromosome Location . End  4095582
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06F4.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38544 CLH-4, isoform a 117.6 1050 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052678
WBRNAi00018319
WBRNAi00035277
WBRNAi00077548

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T06F4.2a 4095244 4095582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000531 clh-4 T06F4.2 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:T06F4.2a 4095244 4095582 -1
CDS:T06F4.2a 4095626 4095817 -1
CDS:T06F4.2a 4096225 4096325 -1
CDS:T06F4.2a 4096374 4096439 -1
CDS:T06F4.2a 4096494 4096663 -1
CDS:T06F4.2a 4096714 4096838 -1
CDS:T06F4.2a 4096886 4097040 -1
CDS:T06F4.2a 4097091 4097221 -1
CDS:T06F4.2a 4097268 4097383 -1
CDS:T06F4.2a 4097427 4097585 -1
CDS:T06F4.2a 4098009 4098107 -1
CDS:T06F4.2a 4098166 4098318 -1
CDS:T06F4.2a 4098363 4098447 -1
CDS:T06F4.2a 4098494 4098677 -1
CDS:T06F4.2a 4098977 4099396 -1
CDS:T06F4.2a 4099683 4099955 -1
CDS:T06F4.2a 4100008 4100143 -1
CDS:T06F4.2a 4100192 4100283 -1
CDS:T06F4.2a 4100380 4100536 -1

1 Sequence

Length
3153

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T06F4.2a.1 T06F4.2a.1 3190   X: 4095244-4100573