WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK470.2c.1 Sequence Name  ZK470.2c.1
Length (nt)  1404   Chromosome Location  X: 4135155-4147838
Chromosome . Primary Identifier  X Chromosome Location . Start  4135155
Chromosome Location . End  4147838 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK470.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022745 ZK470.2 ZK470.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK470.2c ZK470.2c 783   X: 4135160-4135261

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK470.2c.1 4135155 4147838 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230030   107   X: 4135155-4135261 Caenorhabditis elegans
Exon230031   76   X: 4136927-4137002 Caenorhabditis elegans
Exon230032   89   X: 4137514-4137602 Caenorhabditis elegans
Exon230034   41   X: 4137859-4137899 Caenorhabditis elegans
Exon230038   112   X: 4146448-4146559 Caenorhabditis elegans
Exon230040   258   X: 4146761-4147018 Caenorhabditis elegans
Exon230043   721   X: 4147118-4147838 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK470.2c.1 4135155 4147838 1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
transcript