WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52B9.9 Sequence Name  C52B9.9
Length (nt)  1917   Chromosome Location  X: 4271288-4271419
Chromosome . Primary Identifier  X Chromosome Location . Start  4271288
Chromosome Location . End  4271419
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52B9.9

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16940 MEC-18 70.1 638 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00043019
WBRNAi00012300
WBRNAi00030076

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52B9.9 4271288 4271419 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003179 mec-18 C52B9.9 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52B9.9 4271288 4271419 -1
CDS:C52B9.9 4271461 4271591 -1
CDS:C52B9.9 4271639 4271807 -1
CDS:C52B9.9 4271861 4271943 -1
CDS:C52B9.9 4271994 4272239 -1
CDS:C52B9.9 4272296 4272467 -1
CDS:C52B9.9 4272516 4272737 -1
CDS:C52B9.9 4272793 4272994 -1
CDS:C52B9.9 4273035 4273070 -1
CDS:C52B9.9 4273150 4273170 -1
CDS:C52B9.9 4273220 4273406 -1
CDS:C52B9.9 4273784 4273904 -1
CDS:C52B9.9 4273949 4274035 -1
CDS:C52B9.9 4274083 4274190 -1

1 Sequence

Length
1917

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52B9.9.1 C52B9.9.1 2066   X: 4271165-4274216