WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R160.1a Sequence Name  R160.1a
Length (nt)  1326   Chromosome Location  X: 4389376-4389449
Chromosome . Primary Identifier  X Chromosome Location . Start  4389376
Chromosome Location . End  4389449
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R160.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33813 DPY-23, isoform a 50.3 441 Caenorhabditis elegans
 

Other

23 RNAi

WormBase ID
WBRNAi00009080
WBRNAi00115730
WBRNAi00051990
WBRNAi00080532
WBRNAi00066850
WBRNAi00101330
WBRNAi00113556
WBRNAi00079358
WBRNAi00079360
WBRNAi00027589
WBRNAi00094833
WBRNAi00094832
WBRNAi00026127
WBRNAi00001684
WBRNAi00064358
WBRNAi00079357
WBRNAi00079359
WBRNAi00098478
WBRNAi00098511
WBRNAi00098514
WBRNAi00098517
WBRNAi00098520
WBRNAi00098564

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R160.1a 4389376 4389449 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001082 dpy-23 R160.1 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:R160.1a 4389376 4389449 1
CDS:R160.1a 4389692 4389857 1
CDS:R160.1a 4389907 4390089 1
CDS:R160.1a 4390832 4390849 1
CDS:R160.1a 4391039 4391174 1
CDS:R160.1a 4391225 4391366 1
CDS:R160.1a 4391416 4391535 1
CDS:R160.1a 4391583 4391667 1
CDS:R160.1a 4391719 4391867 1
CDS:R160.1a 4392864 4392981 1
CDS:R160.1a 4393032 4393166 1

1 Sequence

Length
1326

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R160.1a.1 R160.1a.1 1980   X: 4389359-4393803