WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F02E8.4.1 Sequence Name  F02E8.4.1
Length (nt)  2489   Chromosome Location  X: 4454120-4457304
Chromosome . Primary Identifier  X Chromosome Location . Start  4454120
Chromosome Location . End  4457304 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017177 F02E8.4 F02E8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F02E8.4 F02E8.4 2136   X: 4454128-4454243

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F02E8.4.1 4454120 4457304 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon230806   124   X: 4454120-4454243 Caenorhabditis elegans
Exon230807   419   X: 4454292-4454710 Caenorhabditis elegans
Exon230808   314   X: 4454758-4455071 Caenorhabditis elegans
Exon230809   201   X: 4455118-4455318 Caenorhabditis elegans
Exon230810   168   X: 4455366-4455533 Caenorhabditis elegans
Exon230811   231   X: 4455714-4455944 Caenorhabditis elegans
Exon230812   301   X: 4456223-4456523 Caenorhabditis elegans
Exon230813   731   X: 4456574-4457304 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F02E8.4.1 4454120 4457304 1

1 Sequence

Length
2489

1 Sequence Ontology Term

Identifier Name Description
transcript