WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F02E8.5 Sequence Name  F02E8.5
Length (nt)  1584   Chromosome Location  X: 4459869-4459956
Chromosome . Primary Identifier  X Chromosome Location . Start  4459869
Chromosome Location . End  4459956
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F02E8.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53669 ATG-16.1 59.4 527 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00043822
WBRNAi00012786
WBRNAi00076270
WBRNAi00098216
WBRNAi00092350
WBRNAi00092349
WBRNAi00114315

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F02E8.5 4459869 4459956 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017178 atg-16.1 F02E8.5 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F02E8.5 4459869 4459956 -1
CDS:F02E8.5 4460002 4460151 -1
CDS:F02E8.5 4460199 4460466 -1
CDS:F02E8.5 4460528 4460645 -1
CDS:F02E8.5 4460944 4461070 -1
CDS:F02E8.5 4461123 4461244 -1
CDS:F02E8.5 4461293 4461383 -1
CDS:F02E8.5 4461626 4461697 -1
CDS:F02E8.5 4461741 4461871 -1
CDS:F02E8.5 4461920 4462040 -1
CDS:F02E8.5 4462100 4462307 -1
CDS:F02E8.5 4462369 4462456 -1

1 Sequence

Length
1584

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F02E8.5.1 F02E8.5.1 1859   X: 4459603-4462465