WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07A12.5b Sequence Name  C07A12.5b
Length (nt)  2052   Chromosome Location  X: 4514108-4514158
Chromosome . Primary Identifier  X Chromosome Location . Start  4514108
Chromosome Location . End  4514158
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A12.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53297 SPR-3, isoform b 79.3 683 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00113378
WBRNAi00000791
WBRNAi00114341
WBRNAi00010358
WBRNAi00039964
WBRNAi00067551

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C07A12.5b 4514108 4514158 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005008 spr-3 C07A12.5 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C07A12.5b 4514108 4514158 1
CDS:C07A12.5b 4514212 4514834 1
CDS:C07A12.5b 4514941 4515229 1
CDS:C07A12.5b 4515289 4516084 1
CDS:C07A12.5b 4516161 4516453 1

1 Sequence

Length
2052

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07A12.5b.1 C07A12.5b.1 2503   X: 4514093-4516889