WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C07A12.3a Sequence Name  C07A12.3a
Length (nt)  1629   Chromosome Location  X: 4532691-4532901
Chromosome . Primary Identifier  X Chromosome Location . Start  4532691
Chromosome Location . End  4532901
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07A12.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30855 NHR-35, isoform a 61.0 542 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00086264
WBRNAi00028612
WBRNAi00114327
WBRNAi00039962
WBRNAi00010357
WBRNAi00000562

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:C07A12.3a 4532691 4532901 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003628 nhr-35 C07A12.3 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier 		Start End Strand
CDS:C07A12.3a 4532691 4532901 1
CDS:C07A12.3a 4532951 4533109 1
CDS:C07A12.3a 4533157 4533256 1
CDS:C07A12.3a 4533830 4534028 1
CDS:C07A12.3a 4534077 4534205 1
CDS:C07A12.3a 4534386 4534528 1
CDS:C07A12.3a 4534575 4534699 1
CDS:C07A12.3a 4535169 4535320 1
CDS:C07A12.3a 4535368 4535488 1
CDS:C07A12.3a 4535536 4535650 1
CDS:C07A12.3a 4537035 4537112 1
CDS:C07A12.3a 4537162 4537258 1

1 Sequence

Length
1629

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C07A12.3a.1 C07A12.3a.1 1917   X: 4532691-4537546