WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46C11.3.2 Sequence Name  C46C11.3.2
Length (nt)  1319   Chromosome Location  X: 4622324-4631841
Chromosome . Primary Identifier  X Chromosome Location . Start  4622324
Chromosome Location . End  4631841 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46C11.3.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016706 C46C11.3 C46C11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46C11.3 C46C11.3 726   X: 4629056-4629172

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46C11.3.2 4622324 4631841 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231249   327   X: 4622324-4622650 Caenorhabditis elegans
Exon231250   134   X: 4629039-4629172 Caenorhabditis elegans
Exon231253   145   X: 4629430-4629574 Caenorhabditis elegans
Exon231255   69   X: 4629957-4630025 Caenorhabditis elegans
Exon231257   138   X: 4630069-4630206 Caenorhabditis elegans
Exon231259   71   X: 4631288-4631358 Caenorhabditis elegans
Exon231261   435   X: 4631407-4631841 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46C11.3.2 4622324 4631841 1

1 Sequence

Length
1319

1 Sequence Ontology Term

Identifier Name Description
transcript