WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F55D10.1.1 Sequence Name  F55D10.1.1
Length (nt)  2972   Chromosome Location  X: 4733095-4738592
Chromosome . Primary Identifier  X Chromosome Location . Start  4733095
Chromosome Location . End  4738592 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F55D10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018877 aman-1 F55D10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55D10.1 F55D10.1 2868   X: 4733100-4733171

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F55D10.1.1 4733095 4738592 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231488   77   X: 4733095-4733171 Caenorhabditis elegans
Exon231489   109   X: 4733898-4734006 Caenorhabditis elegans
Exon231490   82   X: 4734062-4734143 Caenorhabditis elegans
Exon231491   187   X: 4734197-4734383 Caenorhabditis elegans
Exon231492   99   X: 4734522-4734620 Caenorhabditis elegans
Exon231493   109   X: 4734671-4734779 Caenorhabditis elegans
Exon231494   167   X: 4734827-4734993 Caenorhabditis elegans
Exon231495   117   X: 4735339-4735455 Caenorhabditis elegans
Exon231496   305   X: 4735504-4735808 Caenorhabditis elegans
Exon231497   70   X: 4735851-4735920 Caenorhabditis elegans
Exon231498   101   X: 4735971-4736071 Caenorhabditis elegans
Exon231499   130   X: 4736116-4736245 Caenorhabditis elegans
Exon231500   186   X: 4736637-4736822 Caenorhabditis elegans
Exon231501   207   X: 4736869-4737075 Caenorhabditis elegans
Exon231502   125   X: 4737127-4737251 Caenorhabditis elegans
Exon231503   102   X: 4737293-4737394 Caenorhabditis elegans
Exon231504   166   X: 4737450-4737615 Caenorhabditis elegans
Exon231505   123   X: 4737664-4737786 Caenorhabditis elegans
Exon231506   246   X: 4737989-4738234 Caenorhabditis elegans
Exon231507   79   X: 4738283-4738361 Caenorhabditis elegans
Exon231508   185   X: 4738408-4738592 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F55D10.1.1 4733095 4738592 1

1 Sequence

Length
2972

1 Sequence Ontology Term

Identifier Name Description
transcript