WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F43C9.4a.1 Sequence Name  F43C9.4a.1
Length (nt)  1446   Chromosome Location  X: 4796099-4799646
Chromosome . Primary Identifier  X Chromosome Location . Start  4796099
Chromosome Location . End  4799646 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43C9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003245 mig-13 F43C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F43C9.4a F43C9.4a 1089   X: 4796453-4796588

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F43C9.4a.1 4796099 4799646 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon231531   490   X: 4796099-4796588 Caenorhabditis elegans
Exon231533   136   X: 4796767-4796902 Caenorhabditis elegans
Exon231536   141   X: 4797731-4797871 Caenorhabditis elegans
Exon231539   135   X: 4797999-4798133 Caenorhabditis elegans
Exon231542   144   X: 4798492-4798635 Caenorhabditis elegans
Exon231545   76   X: 4798927-4799002 Caenorhabditis elegans
Exon231548   248   X: 4799050-4799297 Caenorhabditis elegans
Exon231551   76   X: 4799571-4799646 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F43C9.4a.1 4796099 4799646 -1

1 Sequence

Length
1446

1 Sequence Ontology Term

Identifier Name Description
transcript