WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R08E3.3a Sequence Name  R08E3.3a
Length (nt)  1368   Chromosome Location  X: 4818618-4818667
Chromosome . Primary Identifier  X Chromosome Location . Start  4818618
Chromosome Location . End  4818667
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08E3.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE33809 R08E3.3, isoform a 53.3 455 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00067824
WBRNAi00067983
WBRNAi00051550
WBRNAi00017591
WBRNAi00034751
WBRNAi00065324

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R08E3.3a 4818618 4818667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019959 R08E3.3 R08E3.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:R08E3.3a 4818618 4818667 1
CDS:R08E3.3a 4818722 4818784 1
CDS:R08E3.3a 4818841 4818952 1
CDS:R08E3.3a 4819003 4819129 1
CDS:R08E3.3a 4819186 4819298 1
CDS:R08E3.3a 4819707 4819973 1
CDS:R08E3.3a 4820021 4820143 1
CDS:R08E3.3a 4820191 4820304 1
CDS:R08E3.3a 4820353 4820454 1
CDS:R08E3.3a 4820521 4820817 1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R08E3.3a.1 R08E3.3a.1 1387   X: 4818599-4820817