WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZC449.6.1 Sequence Name  ZC449.6.1
Length (nt)  1284   Chromosome Location  X: 5009300-5011222
Chromosome . Primary Identifier  X Chromosome Location . Start  5009300
Chromosome Location . End  5011222 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZC449.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022616 hsd-3 ZC449.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZC449.6 ZC449.6 1080   X: 5009504-5009680

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZC449.6.1 5009300 5011222 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232396   381   X: 5009300-5009680 Caenorhabditis elegans
Exon232397   96   X: 5009726-5009821 Caenorhabditis elegans
Exon232398   180   X: 5009873-5010052 Caenorhabditis elegans
Exon232399   141   X: 5010098-5010238 Caenorhabditis elegans
Exon232400   486   X: 5010737-5011222 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZC449.6.1 5009300 5011222 1

1 Sequence

Length
1284

1 Sequence Ontology Term

Identifier Name Description
transcript