WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31H2.1c.1 Sequence Name  C31H2.1c.1
Length (nt)  2239   Chromosome Location  X: 5140448-5146742
Chromosome . Primary Identifier  X Chromosome Location . Start  5140448
Chromosome Location . End  5146742 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H2.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016292 tbc-7 C31H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31H2.1c C31H2.1c 1614   X: 5140781-5140804

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1c.1 5140448 5146742 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232601   167   X: 5140448-5140614 Caenorhabditis elegans
Exon232603   26   X: 5140779-5140804 Caenorhabditis elegans
Exon232606   114   X: 5140926-5141039 Caenorhabditis elegans
Exon232610   148   X: 5142236-5142383 Caenorhabditis elegans
Exon232614   140   X: 5142824-5142963 Caenorhabditis elegans
Exon232618   90   X: 5143422-5143511 Caenorhabditis elegans
Exon232622   141   X: 5143559-5143699 Caenorhabditis elegans
Exon232626   144   X: 5143797-5143940 Caenorhabditis elegans
Exon232630   90   X: 5143987-5144076 Caenorhabditis elegans
Exon232634   93   X: 5144678-5144770 Caenorhabditis elegans
Exon232638   94   X: 5144830-5144923 Caenorhabditis elegans
Exon232642   112   X: 5144973-5145084 Caenorhabditis elegans
Exon232646   120   X: 5145135-5145254 Caenorhabditis elegans
Exon232650   148   X: 5145299-5145446 Caenorhabditis elegans
Exon232654   612   X: 5146131-5146742 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1c.1 5140448 5146742 1

1 Sequence

Length
2239

1 Sequence Ontology Term

Identifier Name Description
transcript