WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C31H2.1c Sequence Name  C31H2.1c
Length (nt)  1614   Chromosome Location  X: 5140781-5140804
Chromosome . Primary Identifier  X Chromosome Location . Start  5140781
Chromosome Location . End  5140804
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H2.1c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53360 TBC-7, isoform c 61.3 537 Caenorhabditis elegans
 

Other

20 RNAi

WormBase ID
WBRNAi00070351
WBRNAi00001656
WBRNAi00041629
WBRNAi00011452
WBRNAi00088913
WBRNAi00060704
WBRNAi00060705
WBRNAi00060706
WBRNAi00060707
WBRNAi00060708
WBRNAi00060709
WBRNAi00060710
WBRNAi00060711
WBRNAi00060712
WBRNAi00070348
WBRNAi00070350
WBRNAi00070349
WBRNAi00088858
WBRNAi00088888
WBRNAi00088953

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C31H2.1c 5140781 5140804 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016292 tbc-7 C31H2.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C31H2.1c 5140781 5140804 1
CDS:C31H2.1c 5140926 5141039 1
CDS:C31H2.1c 5142236 5142383 1
CDS:C31H2.1c 5142824 5142963 1
CDS:C31H2.1c 5143422 5143511 1
CDS:C31H2.1c 5143559 5143699 1
CDS:C31H2.1c 5143797 5143940 1
CDS:C31H2.1c 5143987 5144076 1
CDS:C31H2.1c 5144678 5144770 1
CDS:C31H2.1c 5144830 5144923 1
CDS:C31H2.1c 5144973 5145084 1
CDS:C31H2.1c 5145135 5145254 1
CDS:C31H2.1c 5145299 5145446 1
CDS:C31H2.1c 5146131 5146286 1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C31H2.1c.1 C31H2.1c.1 2239   X: 5140448-5146742
Transcript:C31H2.1c.2 C31H2.1c.2 2320   X: 5140530-5146741