WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C31H2.1c.2 Sequence Name  C31H2.1c.2
Length (nt)  2320   Chromosome Location  X: 5140530-5146741
Chromosome . Primary Identifier  X Chromosome Location . Start  5140530
Chromosome Location . End  5146741 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C31H2.1c.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016292 tbc-7 C31H2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C31H2.1c C31H2.1c 1614   X: 5140781-5140804

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1c.2 5140530 5146741 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232602   275   X: 5140530-5140804 Caenorhabditis elegans
Exon232607   114   X: 5140926-5141039 Caenorhabditis elegans
Exon232611   148   X: 5142236-5142383 Caenorhabditis elegans
Exon232615   140   X: 5142824-5142963 Caenorhabditis elegans
Exon232619   90   X: 5143422-5143511 Caenorhabditis elegans
Exon232623   141   X: 5143559-5143699 Caenorhabditis elegans
Exon232627   144   X: 5143797-5143940 Caenorhabditis elegans
Exon232631   90   X: 5143987-5144076 Caenorhabditis elegans
Exon232635   93   X: 5144678-5144770 Caenorhabditis elegans
Exon232639   94   X: 5144830-5144923 Caenorhabditis elegans
Exon232643   112   X: 5144973-5145084 Caenorhabditis elegans
Exon232647   120   X: 5145135-5145254 Caenorhabditis elegans
Exon232651   148   X: 5145299-5145446 Caenorhabditis elegans
Exon232653   611   X: 5146131-5146741 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C31H2.1c.2 5140530 5146741 1

1 Sequence

Length
2320

1 Sequence Ontology Term

Identifier Name Description
transcript