WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T03G11.3.1 Sequence Name  T03G11.3.1
Length (nt)  1249   Chromosome Location  X: 5174369-5177511
Chromosome . Primary Identifier  X Chromosome Location . Start  5174369
Chromosome Location . End  5177511 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T03G11.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020196 zchc-1A T03G11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T03G11.3 T03G11.3 969   X: 5174569-5174572

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T03G11.3.1 5174369 5177511 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232762   204   X: 5174369-5174572 Caenorhabditis elegans
Exon232763   71   X: 5174651-5174721 Caenorhabditis elegans
Exon232764   132   X: 5174775-5174906 Caenorhabditis elegans
Exon232765   148   X: 5174962-5175109 Caenorhabditis elegans
Exon232766   73   X: 5175865-5175937 Caenorhabditis elegans
Exon232767   97   X: 5175991-5176087 Caenorhabditis elegans
Exon232768   125   X: 5176139-5176263 Caenorhabditis elegans
Exon232769   108   X: 5176309-5176416 Caenorhabditis elegans
Exon232770   72   X: 5176939-5177010 Caenorhabditis elegans
Exon232771   219   X: 5177293-5177511 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T03G11.3.1 5174369 5177511 1

1 Sequence

Length
1249

1 Sequence Ontology Term

Identifier Name Description
transcript