WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H28G03.6.1 Sequence Name  H28G03.6.1
Length (nt)  5542   Chromosome Location  X: 5234669-5243408
Chromosome . Primary Identifier  X Chromosome Location . Start  5234669
Chromosome Location . End  5243408 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H28G03.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003477 mtm-5 H28G03.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H28G03.6 H28G03.6 5235   X: 5234957-5235052

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H28G03.6.1 5234669 5243408 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon232919   384   X: 5234669-5235052 Caenorhabditis elegans
Exon232920   287   X: 5235098-5235384 Caenorhabditis elegans
Exon232921   150   X: 5235431-5235580 Caenorhabditis elegans
Exon232922   95   X: 5236048-5236142 Caenorhabditis elegans
Exon232923   229   X: 5236194-5236422 Caenorhabditis elegans
Exon232924   337   X: 5236470-5236806 Caenorhabditis elegans
Exon232925   267   X: 5236856-5237122 Caenorhabditis elegans
Exon232926   239   X: 5237604-5237842 Caenorhabditis elegans
Exon232927   121   X: 5237888-5238008 Caenorhabditis elegans
Exon232928   452   X: 5238052-5238503 Caenorhabditis elegans
Exon232929   310   X: 5238555-5238864 Caenorhabditis elegans
Exon232930   101   X: 5239288-5239388 Caenorhabditis elegans
Exon232931   559   X: 5239450-5240008 Caenorhabditis elegans
Exon232932   147   X: 5240057-5240203 Caenorhabditis elegans
Exon232933   852   X: 5240281-5241132 Caenorhabditis elegans
Exon232934   201   X: 5241353-5241553 Caenorhabditis elegans
Exon232935   94   X: 5241611-5241704 Caenorhabditis elegans
Exon232936   133   X: 5241755-5241887 Caenorhabditis elegans
Exon232937   295   X: 5242072-5242366 Caenorhabditis elegans
Exon232938   191   X: 5242860-5243050 Caenorhabditis elegans
Exon232939   98   X: 5243311-5243408 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H28G03.6.1 5234669 5243408 -1

1 Sequence

Length
5542

1 Sequence Ontology Term

Identifier Name Description
transcript