WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y34B4A.8c Sequence Name  Y34B4A.8c
Length (nt)  2130   Chromosome Location  X: 5272183-5272339
Chromosome . Primary Identifier  X Chromosome Location . Start  5272183
Chromosome Location . End  5272339
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y34B4A.8c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52457 RGA-8, isoform c 79.8 709 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00107878
WBRNAi00055817
WBRNAi00055823
WBRNAi00055824
WBRNAi00036763
WBRNAi00080592
WBRNAi00020191

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y34B4A.8c 5272183 5272339 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021324 rga-8 Y34B4A.8 Caenorhabditis elegans

16 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y34B4A.8c 5272183 5272339 -1
CDS:Y34B4A.8c 5272398 5272681 -1
CDS:Y34B4A.8c 5272947 5273187 -1
CDS:Y34B4A.8c 5273238 5273384 -1
CDS:Y34B4A.8c 5273441 5273569 -1
CDS:Y34B4A.8c 5273619 5273743 -1
CDS:Y34B4A.8c 5273796 5273998 -1
CDS:Y34B4A.8c 5274259 5274352 -1
CDS:Y34B4A.8c 5274414 5274568 -1
CDS:Y34B4A.8c 5274616 5274862 -1
CDS:Y34B4A.8c 5274910 5274996 -1
CDS:Y34B4A.8c 5275066 5275135 -1
CDS:Y34B4A.8c 5275236 5275287 -1
CDS:Y34B4A.8c 5276516 5276575 -1
CDS:Y34B4A.8c 5278603 5278671 -1
CDS:Y34B4A.8c 5279765 5279774 -1

1 Sequence

Length
2130

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y34B4A.8c.1 Y34B4A.8c.1 2436   X: 5271877-5279774