WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.3a.1 Sequence Name  F32A6.3a.1
Length (nt)  2895   Chromosome Location  X: 5283831-5289724
Chromosome . Primary Identifier  X Chromosome Location . Start  5283831
Chromosome Location . End  5289724 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017974 vps-41 F32A6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.3a F32A6.3a 2280   X: 5286137-5286256

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3a.1 5283831 5289724 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233193   287   X: 5283831-5284117 Caenorhabditis elegans
Exon233196   126   X: 5285946-5286071 Caenorhabditis elegans
Exon233198   138   X: 5286119-5286256 Caenorhabditis elegans
Exon233201   104   X: 5286314-5286417 Caenorhabditis elegans
Exon233204   304   X: 5286465-5286768 Caenorhabditis elegans
Exon233207   128   X: 5286824-5286951 Caenorhabditis elegans
Exon233210   187   X: 5287005-5287191 Caenorhabditis elegans
Exon233213   192   X: 5287243-5287434 Caenorhabditis elegans
Exon233216   648   X: 5287953-5288600 Caenorhabditis elegans
Exon233219   100   X: 5288648-5288747 Caenorhabditis elegans
Exon233222   210   X: 5288797-5289006 Caenorhabditis elegans
Exon233225   212   X: 5289203-5289414 Caenorhabditis elegans
Exon233229   259   X: 5289466-5289724 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.3a.1 5283831 5289724 1

1 Sequence

Length
2895

1 Sequence Ontology Term

Identifier Name Description
transcript