WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.4f.1 Sequence Name  F32A6.4f.1
Length (nt)  2267   Chromosome Location  X: 5289801-5298042
Chromosome . Primary Identifier  X Chromosome Location . Start  5289801
Chromosome Location . End  5298042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.4f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.4f F32A6.4f 477   X: 5290111-5290223

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.1 5289801 5298042 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233236   423   X: 5289801-5290223 Caenorhabditis elegans
Exon233246   119   X: 5290283-5290401 Caenorhabditis elegans
Exon233259   124   X: 5290547-5290670 Caenorhabditis elegans
Exon233270   175   X: 5291681-5291855 Caenorhabditis elegans
Exon233281   105   X: 5292671-5292775 Caenorhabditis elegans
Exon233292   93   X: 5292982-5293074 Caenorhabditis elegans
Exon233302   161   X: 5293576-5293736 Caenorhabditis elegans
Exon233311   104   X: 5295579-5295682 Caenorhabditis elegans
Exon233318   116   X: 5295729-5295844 Caenorhabditis elegans
Exon233324   124   X: 5296640-5296763 Caenorhabditis elegans
Exon233329   146   X: 5296812-5296957 Caenorhabditis elegans
Exon233332   201   X: 5297205-5297405 Caenorhabditis elegans
Exon233336   136   X: 5297565-5297700 Caenorhabditis elegans
Exon233341   151   X: 5297748-5297898 Caenorhabditis elegans
Exon233347   89   X: 5297954-5298042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F32A6.4f.1 5289801 5298042 -1

1 Sequence

Length
2267

1 Sequence Ontology Term

Identifier Name Description
transcript