WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F32A6.2.1 Sequence Name  F32A6.2.1
Length (nt)  2256   Chromosome Location  X: 5298561-5306542
Chromosome . Primary Identifier  X Chromosome Location . Start  5298561
Chromosome Location . End  5306542 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F32A6.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017973 ift-81 F32A6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F32A6.2 F32A6.2 1917   X: 5298750-5298880

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F32A6.2.1 5298561 5306542 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon233295   71   X: 5298561-5298631 Caenorhabditis elegans
Exon233296   31   X: 5298665-5298695 Caenorhabditis elegans
Exon233297   154   X: 5298727-5298880 Caenorhabditis elegans
Exon233298   120   X: 5299474-5299593 Caenorhabditis elegans
Exon233299   124   X: 5299651-5299774 Caenorhabditis elegans
Exon233300   81   X: 5300047-5300127 Caenorhabditis elegans
Exon233301   155   X: 5300215-5300369 Caenorhabditis elegans
Exon233302   85   X: 5301134-5301218 Caenorhabditis elegans
Exon233303   105   X: 5301456-5301560 Caenorhabditis elegans
Exon233304   144   X: 5301619-5301762 Caenorhabditis elegans
Exon233306   80   X: 5302592-5302671 Caenorhabditis elegans
Exon233308   72   X: 5303507-5303578 Caenorhabditis elegans
Exon233309   91   X: 5303841-5303931 Caenorhabditis elegans
Exon233310   150   X: 5303975-5304124 Caenorhabditis elegans
Exon233311   93   X: 5304953-5305045 Caenorhabditis elegans
Exon233312   105   X: 5305261-5305365 Caenorhabditis elegans
Exon233313   87   X: 5305413-5305499 Caenorhabditis elegans
Exon233314   126   X: 5305826-5305951 Caenorhabditis elegans
Exon233315   382   X: 5306161-5306542 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F32A6.2.1 5298561 5306542 1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
transcript