WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C41A3.2a Sequence Name  C41A3.2a
Length (nt)  2337   Chromosome Location  X: 5406718-5407041
Chromosome . Primary Identifier  X Chromosome Location . Start  5406718
Chromosome Location . End  5407041
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41A3.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47266 C41A3.2, isoform a 90.2 778 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00001268
WBRNAi00042273
WBRNAi00010060
WBRNAi00011828
WBRNAi00029715

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C41A3.2a 5406718 5407041 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016559 C41A3.2 C41A3.2 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:C41A3.2a 5406718 5407041 -1
CDS:C41A3.2a 5407094 5407149 -1
CDS:C41A3.2a 5407194 5407271 -1
CDS:C41A3.2a 5407579 5407824 -1
CDS:C41A3.2a 5407867 5407938 -1
CDS:C41A3.2a 5407984 5408249 -1
CDS:C41A3.2a 5408313 5408543 -1
CDS:C41A3.2a 5408789 5408971 -1
CDS:C41A3.2a 5409027 5409120 -1
CDS:C41A3.2a 5409171 5409433 -1
CDS:C41A3.2a 5409917 5410010 -1
CDS:C41A3.2a 5410060 5410142 -1
CDS:C41A3.2a 5410192 5410322 -1
CDS:C41A3.2a 5410369 5410457 -1
CDS:C41A3.2a 5411597 5411723 -1

1 Sequence

Length
2337

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C41A3.2a.1 C41A3.2a.1 2577   X: 5406562-5414350
Transcript:C41A3.2a.2 C41A3.2a.2 2521   X: 5406562-5411751