WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.4q.1 Sequence Name  F14D12.4q.1
Length (nt)  1200   Chromosome Location  X: 5567754-5590493
Chromosome . Primary Identifier  X Chromosome Location . Start  5567754
Chromosome Location . End  5590493 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.4q.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003166 mec-2 F14D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.4q F14D12.4q 1200   X: 5567754-5567829

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4q.1 5567754 5590493 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234243   76   X: 5567754-5567829 Caenorhabditis elegans
Exon234282   104   X: 5582959-5583062 Caenorhabditis elegans
Exon234299   73   X: 5583116-5583188 Caenorhabditis elegans
Exon234316   158   X: 5583715-5583872 Caenorhabditis elegans
Exon234333   129   X: 5583923-5584051 Caenorhabditis elegans
Exon234350   135   X: 5584115-5584249 Caenorhabditis elegans
Exon234367   119   X: 5584296-5584414 Caenorhabditis elegans
Exon234384   81   X: 5584464-5584544 Caenorhabditis elegans
Exon234397   148   X: 5586251-5586398 Caenorhabditis elegans
Exon234414   74   X: 5586475-5586548 Caenorhabditis elegans
Exon234428   86   X: 5587713-5587798 Caenorhabditis elegans
Exon234440   17   X: 5590477-5590493 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.4q.1 5567754 5590493 1

1 Sequence

Length
1200

1 Sequence Ontology Term

Identifier Name Description
transcript