WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14D12.5.1 Sequence Name  F14D12.5.1
Length (nt)  2175   Chromosome Location  X: 5595787-5599330
Chromosome . Primary Identifier  X Chromosome Location . Start  5595787
Chromosome Location . End  5599330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017464 sulp-2 F14D12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14D12.5 F14D12.5 1959   X: 5595936-5596111

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.5.1 5595787 5599330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon234451   325   X: 5595787-5596111 Caenorhabditis elegans
Exon234452   268   X: 5596161-5596428 Caenorhabditis elegans
Exon234453   73   X: 5596480-5596552 Caenorhabditis elegans
Exon234454   107   X: 5596607-5596713 Caenorhabditis elegans
Exon234455   368   X: 5596772-5597139 Caenorhabditis elegans
Exon234456   151   X: 5597579-5597729 Caenorhabditis elegans
Exon234457   165   X: 5597782-5597946 Caenorhabditis elegans
Exon234458   103   X: 5597996-5598098 Caenorhabditis elegans
Exon234459   65   X: 5598146-5598210 Caenorhabditis elegans
Exon234460   65   X: 5598261-5598325 Caenorhabditis elegans
Exon234461   189   X: 5598376-5598564 Caenorhabditis elegans
Exon234462   71   X: 5598618-5598688 Caenorhabditis elegans
Exon234463   149   X: 5599062-5599210 Caenorhabditis elegans
Exon234464   76   X: 5599255-5599330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F14D12.5.1 5595787 5599330 -1

1 Sequence

Length
2175

1 Sequence Ontology Term

Identifier Name Description
transcript