WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F14D12.6a Sequence Name  F14D12.6a
Length (nt)  1221   Chromosome Location  X: 5609309-5609430
Chromosome . Primary Identifier  X Chromosome Location . Start  5609309
Chromosome Location . End  5609430
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14D12.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE35478 OCTR-1, isoform a 47.1 406 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00107776
WBRNAi00044587
WBRNAi00072207
WBRNAi00013265
WBRNAi00030932

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F14D12.6a 5609309 5609430 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006411 octr-1 F14D12.6 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:F14D12.6a 5609309 5609430 -1
CDS:F14D12.6a 5609477 5609552 -1
CDS:F14D12.6a 5609613 5609786 -1
CDS:F14D12.6a 5609845 5609993 -1
CDS:F14D12.6a 5610048 5610218 -1
CDS:F14D12.6a 5610277 5610375 -1
CDS:F14D12.6a 5610463 5610621 -1
CDS:F14D12.6a 5610673 5610844 -1
CDS:F14D12.6a 5611122 5611220 -1

1 Sequence

Length
1221

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F14D12.6a.1 F14D12.6a.1 1455   X: 5609110-5611255